
Professor
Georgia Cancer Center
Infectious Disease Division | Department of Medicine
Medical College of Georgia
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The Santhakumar Manicassamy Lab
Health Sciences Campus
1410 Laney Walker Boulevard, CN4158A
Office: (706) 721-7902
Lab: (706) 721-7903
Our research examines how innate immune cells influence adaptive immune responses to improve therapies for inflammatory diseases, cancer, and vaccines. We investigate interactions among commensal flora, dietary metabolites, and the immune system in cancer, immune tolerance, and homeostasis.
The team identifies signaling networks and transcription factors that direct dendritic cells and macrophages toward regulatory or inflammatory states, analyzes immune responses to mucosal pathogens and vaccines, and studies immune regulatory pathways that contribute to tumor-induced immune suppression, a significant barrier to cancer immunotherapy.

Lung, breast, and colon cancers account for approximately 50% of cancer-related deaths in Georgia. Lung cancer is the leading cause of cancer death for both men and women, with colorectal cancer ranking second or third.
These cancers show limited response to immunotherapy and are also resistant to single-agent therapies, often requiring combination or novel approaches to overcome complex immune evasion. In order to develop effective treatments for these (and other) cancers, we must develop more effective treatments. Studying particular biochemical pathways in the tumor microenvironment will allow us to learn how to disrupt the immunosuppressive pathways and thus increase the susceptibility of tumors to attack by activated immune cells. These strategies have the potential to significantly impact clinical practice by improving survival rates by developing more effective, less toxic therapies to lung, breast, and colon cancer, thus increasing the lifespan of Georgia’s citizens.
Dr. Manicassamy ’s research is focused on:
Our laboratory is focused on immune responses to tumors, pathogens, and commensal flora, in particular related to lung, colon, and breast cancer. Other key areas of focus include immune-mediated inflammatory diseases, mucosal tolerance, vaccine-induced immune responses, and immunotherapy. We incorporate systems biology approaches and advanced technologies, including Cytoplex, multicolor FACS, RNA-seq, metabolomics, proteomics, and Luminex.
Innate control of anti-tumor immune responses
Lung, breast, and colon cancers account for approximately 50% of cancer-related deaths in Georgia. Lung cancer is the leading cause of cancer death for both men and women, with colorectal cancer ranking second or third. These cancers are highly immunosuppressive, characterized as "cold tumors" with few immune cells and limited response to immunotherapy. They are also resistant to single-agent therapies, often requiring combination or novel approaches to overcome complex immune evasion. Understanding these mechanisms is essential for developing effective treatments. Our research aims to identify new molecular targets that disrupt tumor-induced immune suppression and enhance antitumor immunity. We have found that the immunosuppressive tumor microenvironment (TME) is characterized by elevated levels of Wnt ligands and retinoic acid (RA). Tumors use the Wnt/β-catenin and RA-RXRα pathways to evade immune detection, and patients with high β-catenin and RXRα expression have lower survival rates. Our recent data indicate that disrupting these pathways can convert cold tumors into hot tumors, increasing their susceptibility to immune attack by activating immune cells within the TME. We are investigating whether blocking the Wnt/β-catenin and RA-RXRα pathways with TLR-based adjuvant treatments can enhance and sustain immune responses, thereby improving patient outcomes. These strategies have the potential to significantly impact clinical practice by improving survival rates through more effective, less toxic therapies. Our studies will provide preclinical evidence that the Wnt/β-catenin and RA-RXRα pathways are promising targets for inducing robust immune responses against lung, breast, and colon cancers.

Modulation of mucosal immune responses by gut microbiota and dietary metabolites.
Our objective is to identify new molecular targets for immune-based therapies in inflammatory bowel disease (IBD) and colorectal cancer (CRC). Preventing and treating these conditions remains a significant challenge in Georgia, where CRC rates are rising, particularly among younger, rural, and minority populations. The gut microbiota and its metabolites are key regulators of local and systemic immune responses. Disruption of commensal balance and loss of immune tolerance contribute to IBD and CRC. We have demonstrated that activating the PPARα and Wnt pathways in innate immune cells enables dietary lipids to regulate gut mucosal immunity and maintain commensal homeostasis. Additionally, we have identified new roles for HCAR1 (GPR81) cell-surface receptors, which respond to bacteria- and diet-derived metabolites, including D- and L-lactate and 3,5-dihydroxybenzoic acid. This pathway is critical for anti-inflammatory responses, oral tolerance, gut homeostasis, and suppression of colon cancer linked to intestinal inflammation. Our current research examines how the PPARα, Wnt, and HCAR1 pathways regulate commensal homeostasis and influence immune responses. These insights will support the development therapies targeting these immune regulatory pathways in IBD and CRC.

Innate control of adaptive immune responses to mucosal pathogens
Early innate immune responses to infectious agents are critical for determining infection outcomes and survival. Dendritic cells (DCs) play a central role in activating both innate and adaptive immune cells, making them vital for vaccine development and immunotherapy.
Our main objective is to identify the signaling networks and transcription factors that enable DCs to mount strong immune responses against mucosal pathogens, such as the influenza virus, Salmonella, and Candida albicans. These insights will guide the development of improved vaccine strategies to strengthen pathogen immunity.
We are also evaluating recombinant live attenuated influenza virus (LAIV) as a vaccine adjuvant platform by incorporating tumor-associated antigen epitopes and siRNAs or miRNAs that target immune regulatory pathways. This approach aims to counteract immune suppression and reprogram the tumor microenvironment to enhance cancer immunotherapy.
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​ Manivasagam, S., Han, J., Teghanemt, A., Keen, H., Sownthirarajan, B., Cheng, B., Singh, A., Lewis, A., Vogel, O. A., Loganathan, G., Huang, L., Panis, M., Meyerholz, D. K., tenOever, B., Perez, J. T., , Issuree, P. D. & Manicassamy, B., Apr 9 2025, In: Cell Host and Microbe. 33, 4, p. 512-528.e7 Research output: Contribution to journal › Article › peer-review |
​ , , , , , & Dong, Z., 2024, In: Autophagy. 20, 5, p. 1032-1053 22 p. Research output: Contribution to journal › Article › peer-review |
​ Manoharan, I., Shanmugam, A. K., Ramalingam, M., , , , , & , Sep 20 2023, In: Journal of Immunology. 211, 5, p. 853-861 9 p. Research output: Contribution to journal › Article › peer-review |
​ Hu, X., Ma, Z., Li, S., Wen, L., Huo, Y., , & Dong, Z., Mar 1 2023, In: Laboratory investigation; a journal of technical methods and pathology. 103, 3, p. 100009 1 p., 100009. Research output: Contribution to journal › Article › peer-review |
​ Manoharan, I., Swafford, D., Shanmugam, A. K., , , , , Dong, Z., & , Jul 15 2022, In: Journal of Immunology. 209, 2, p. 368-378 11 p. Research output: Contribution to journal › Article › peer-review |
​ Manoharan, I., Swafford, D., Shanmugam, A., , , & , Sep 1 2021, In: Journal of Immunology. 207, 5, p. 1428-1436 9 p. Research output: Contribution to journal › Article › peer-review |
​ Bridges, A. E., Ramachandran, S., Tamizhmani, K., Parwal, U., Lester, A., Rajpurohit, P., Morera, D. S., Hasanali, S. L., Arjunan, P., Jedeja, R. N., , Martin, P. M., Korkaya, H., , , , , , Ganapathy, V. & , Sep 2021, In: Molecular Cancer Research. 19, 9, p. 1486-1497 12 p. Research output: Contribution to journal › Article › peer-review |
​ Manoharan, I., , & , Jul 29 2021, In: Frontiers in immunology. 12, 691134. Research output: Contribution to journal › Review article › peer-review |
​ , & Swafford, D., 2021, Methods in Molecular Biology. Humana Press Inc., p. 133-146 14 p. (Methods in Molecular Biology; vol. 2224). Research output: Chapter in Book/Report/Conference proceeding › Chapter |
​ Swafford, D., Shanmugam, A. K., Ranganathan, P., Manoharan, I., Hussein, M. S., , , Koni, P., , & , Oct 15 2020, In: Journal of Immunology. 205, 8, p. 2265-2275 11 p. Research output: Contribution to journal › Article › peer-review |
​ Bridges, A. E., Ramachandran, S., Pathania, R., Parwal, U., Lester, A., Rajpurohit, P., Morera, D. S., , , Korkaya, H., , , , , Ganapathy, V. & , Sep 15 2020, In: Cancer Research. 80, 18, p. 3855-3866 12 p. Research output: Contribution to journal › Article › peer-review |
​ Vogel, O. A., Han, J., Liang, C. Y., , Perez, J. T. & Manicassamy, B., Sep 2020, In: PLoS Pathogens. 16, 9, e1008842. Research output: Contribution to journal › Article › peer-review |
​ Kandasamy, M., Furlong, K., Perez, J. T., & Manicassamy, B., May 1 2020, In: Journal of Virology. 94, 9, e00057-20. Research output: Contribution to journal › Article › peer-review |
​ Artham, S., Verma, A., Alwhaibi, A., Adil, M. S., , & Somanath, P. R., Apr 2020, In: American Journal of Physiology - Lung Cellular and Molecular Physiology. 318, 4, p. L750-L761 Research output: Contribution to journal › Article › peer-review |
​ Suryawanshi, A., Hussein, M. S., & , Feb 17 2020, In: Frontiers in immunology. 11, 122. Research output: Contribution to journal › Review article › peer-review |
​ Swafford, D., Shanmugam, A., Ranganathan, P., Hussein, M. S., Koni, P. A., , & , May 1 2018, In: Journal of Immunology. 200, 9, p. 3259-3268 10 p. Research output: Contribution to journal › Article › peer-review |
​ Ranganathan, P., Shanmugam, A. K., Swafford, D., Suryawanshi, A., Bhattacharjee, P., Hussein, M. S., Koni, P., , , , Ganapathy, V. & , Mar 1 2018, In: Journal of Immunology. 200, 5, p. 1781-1789 9 p. Research output: Contribution to journal › Article › peer-review |
​ Suryawanshi, A., Tadagavadi, R. K., Swafford, D. & , Oct 27 2016, In: Frontiers in immunology. 7, OCT, 460. Research output: Contribution to journal › Review article › peer-review |
​ Kandasamy, M., Suryawanshi, A., Tundup, S., Perez, J. T., Schmolke, M., & Manicassamy, B., Jul 2016, In: PLoS Pathogens. 12, 7, e1005754. Research output: Contribution to journal › Article › peer-review |
​ Manoharan, I., Suryawanshi, A., Hong, Y., Ranganathan, P., Shanmugam, A. K., Ahmad, S., Swafford, D., Manicassamy, B., Ramesh, G., Koni, P., & , Jun 1 2016, In: Journal of Immunology. 196, 11, p. 4739-4749 11 p. Research output: Contribution to journal › Article › peer-review |
​ Hong, Y., Manoharan, I., Suryawanshi, A., Shanmugam, A., Swafford, D., Ahmad, S., Chinnadurai, R., Manicassamy, B., , Mellor, A. L., , & , Apr 2 2016, In: OncoImmunology. 5, 4 Research output: Contribution to journal › Article › peer-review |
​ Pathania, R., Ramachandran, S., Mariappan, G., Thakur, P., , Choi, J. H., , , , Sharma, S., , Ganapathy, V. & , 2016, In: Cancer Research. 76, 11, p. 3224-3235 12 p. Research output: Contribution to journal › Article › peer-review |
​ Suryawanshi, A. & , Dec 2 2015, In: OncoImmunology. 4, 12 Research output: Contribution to journal › Article › peer-review |
​ Pathania, R., Ramachandran, S., Elangovan, S., Padia, R., Yang, P., Cinghu, S., Veeranan-Karmegam, R., Arjunan, P., Gnana-Prakasam, J. P., , Pei, L., Chang, C. S., Choi, J. H., , , , Sharma, S., Ganapathy, V., Jothi, R. & , Apr 22 2015, In: Nature communications. 6, 6910. Research output: Contribution to journal › Article › peer-review |
​ Suryawanshi, A., Manoharan, I., Hong, Y., Swafford, D., Majumdar, T., Taketo, M. M., Manicassamy, B., Koni, P. A., , Sun, Z., Mellor, A. L., & , Apr 1 2015, In: Journal of Immunology. 194, 7, p. 3295-3304 10 p. Research output: Contribution to journal › Article › peer-review |
​ Hong, Y., Manoharan, I., Suryawanshi, A., Majumdar, T., Angus-Hill, M. L., Koni, P. A., Manicassamy, B., Mellor, A. L., & , Feb 15 2015, In: Cancer Research. 75, 4, p. 656-665 10 p. Research output: Contribution to journal › Article › peer-review |
​ Swafford, D. & , 2015, In: Discovery Medicine. 19, 105, p. 303-310 8 p. Research output: Contribution to journal › Article › peer-review |
​ Manoharan, I., Hong, Y., Suryawanshi, A., Angus-Hill, M. L., Sun, Z., Mellor, A. L., & , Oct 15 2014, In: Journal of Immunology. 193, 8, p. 4203-4213 11 p. Research output: Contribution to journal › Article › peer-review |
​ & Manoharan, I., 2014, Mouse Genetics: Methods and Protocols. Humana Press Inc., p. 437-448 12 p. (Methods in Molecular Biology; vol. 1194). Research output: Chapter in Book/Report/Conference proceeding › Chapter |
​ Ranganathan, P., Jayakumar, C., & Ramesh, G., Nov 15 2013, In: American Journal of Physiology - Renal Physiology. 305, 10, p. F1422-F1427 Research output: Contribution to journal › Article › peer-review |
​ , Nov 4 2011, In: Science. 334, 6056, p. 594 1 p. Research output: Contribution to journal › Comment/debate › peer-review |
​ Denning, T. L., Norris, B. A., Medina-Contreras, O., , Geem, D., Madan, R., Karp, C. L. & Pulendran, B., Jul 15 2011, In: Journal of Immunology. 187, 2, p. 733-747 15 p. Research output: Contribution to journal › Article › peer-review |
​ , Reizis, B., Ravindran, R., Nakaya, H., Salazar-Gonzalez, R. M., Wang, Y. C. & Pulendran, B., Aug 13 2010, In: Science. 329, 5993, p. 849-853 5 p. Research output: Contribution to journal › Article › peer-review |
​ Manicassamy, B., , Belicha-Villanueva, A., Pisanelli, G., Pulendran, B. & GarcÃa-Sastre, A., Jun 22 2010, In: Proceedings of the National Academy of Sciences of the United States of America. 107, 25, p. 11531-11536 6 p. Research output: Contribution to journal › Article › peer-review |
​ , Nov 2009, In: Current Opinion in Investigational Drugs. 10, 11, p. 1225-1235 11 p. Research output: Contribution to journal › Review article › peer-review |
​ & Pulendran, B., Aug 2009, In: Seminars in Immunology. 21, 4, p. 185-193 9 p. Research output: Contribution to journal › Review article › peer-review |
​ , Ravindran, R., Deng, J., Oluoch, H., Denning, T. L., Kasturi, S. P., Rosenthal, K. M., Evavold, B. D. & Pulendran, B., Apr 2009, In: Nature Medicine. 15, 4, p. 401-409 9 p. Research output: Contribution to journal › Article › peer-review |
​ Jiang, H., Wang, J., Manicassamy, B., , Caffrey, M. & Rong, L., 2009, In: Virologica Sinica. 24, 2, p. 121-135 15 p. Research output: Contribution to journal › Article › peer-review |
​ , Yin, D., Zhang, Z., Molinero, L. L., Alegre, M. L. & Sun, Z., Jul 1 2008, In: Journal of Immunology. 181, 1, p. 513-520 8 p. Research output: Contribution to journal › Article › peer-review |
​ Xiang, Z., Ma, L. L., , Ganesh, B. B., Williams, P., Chari, R., Chong, A. & Yin, D. P., Apr 2008, In: Transplantation. 85, 8, p. 1205-1211 7 p. Research output: Contribution to journal › Article › peer-review |
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